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  5. Sam_g13503

Sam_g13503


Description : TOR-dependent regulatory protein *(MRF) of protein translation & original description: none


Gene families : OG0002034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13503
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT3G48390 No alias MA3 domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g087900 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Cba_g07163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24725 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Cba_g27297 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Ceric.27G043500.1 Ceric.27G043500 TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Cre09.g415800 No alias Multi-process regulation.TOR signalling pathway.MRF... 0.02 OrthoFinder output from all 47 species
Dac_g02868 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Ppi_g11463 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Spa_g30467 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Tin_g04689 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 114 224
IPR003891 Initiation_fac_eIF4g_MI 580 688
IPR003891 Initiation_fac_eIF4g_MI 278 375
IPR003891 Initiation_fac_eIF4g_MI 416 526
No external refs found!