Description : E3 ubiquitin ligase *(SINA) & original description: none
Gene families : OG0000462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000462_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g13394 | |
Cluster | HCCA: Cluster_25 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g110024 | SINAT2 | E3 ubiquitin ligase *(SINA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene64614.t1 | Aspi01Gene64614 | E3 ubiquitin ligase *(SINA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0069.g036509 | No alias | E3 ubiquitin ligase *(SINA) & original description: CDS=60-1088 | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g20610.1 | LOC_Os06g20610 | E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Mp3g21220.1 | SINAT2 | SINA-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002348 | No alias | E3 ubiquitin ligase *(SINA) & original description: CDS=122-1123 | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e035769_P001 | Zm00001e035769 | SINA-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005737 | cytoplasm | IEA | Interproscan |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
BP | GO:0007275 | multicellular organism development | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018121 | 7-in-absentia-prot_TRAF-dom | 102 | 301 |
No external refs found! |