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  5. Sam_g13003

Sam_g13003


Description : component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex & original description: none


Gene families : OG0001535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00255470 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1B... 0.03 OrthoFinder output from all 47 species
AT1G09640 No alias Translation elongation factor EF1B, gamma chain 0.02 OrthoFinder output from all 47 species
AT1G57720 No alias Translation elongation factor EF1B, gamma chain 0.05 OrthoFinder output from all 47 species
Adi_g019108 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Aev_g32138 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Ala_g01717 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Aob_g06588 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Aop_g11146 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.04 OrthoFinder output from all 47 species
Aspi01Gene23877.t1 Aspi01Gene23877 component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Azfi_s0051.g031261 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Cba_g11340 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Ceric.09G069500.1 Ceric.09G069500 component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.21 No alias Protein biosynthesis.translation elongation.eEF1B... 0.02 OrthoFinder output from all 47 species
Dac_g06348 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.04 OrthoFinder output from all 47 species
Dcu_g07504 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
GSVIVT01025941001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.04 OrthoFinder output from all 47 species
Gb_08439 No alias component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g12794.3 LOC_Os02g12794 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.06 OrthoFinder output from all 47 species
LOC_Os02g12800.1 LOC_Os02g12800 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.04 OrthoFinder output from all 47 species
LOC_Os06g37440.1 LOC_Os06g37440 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species
Lfl_g17322 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Mp7g04100.1 No alias component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.1 OrthoFinder output from all 47 species
Msp_g08318 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.09 OrthoFinder output from all 47 species
Solyc06g011280.3.1 Solyc06g011280 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.06 OrthoFinder output from all 47 species
Solyc11g028100.2.1 Solyc11g028100 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.01 OrthoFinder output from all 47 species
Spa_g08037 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Tin_g02785 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Zm00001e014465_P001 Zm00001e014465 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.1 OrthoFinder output from all 47 species
Zm00001e024937_P001 Zm00001e024937 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.02 OrthoFinder output from all 47 species
Zm00001e037277_P002 Zm00001e037277 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004046 GST_C 121 196
IPR004045 Glutathione_S-Trfase_N 5 75
IPR001662 EF1B_G_C 267 376
No external refs found!