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  5. Sam_g12940

Sam_g12940


Description : not classified & original description: none


Gene families : OG0003340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12940

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00043360 evm_27.TU.AmTr_v1... CBS domain-containing protein CBSX3, mitochondrial... 0.02 OrthoFinder output from all 47 species
Aob_g16084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0229.g059112 No alias not classified & original description: CDS=287-946 0.02 OrthoFinder output from all 47 species
Dac_g04511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 130 186
IPR000644 CBS_dom 74 118
No external refs found!