Description : component *(THOC5) of mRNP trafficking THO subcomplex & original description: none
Gene families : OG0003012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003012_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g12861 | |
Cluster | HCCA: Cluster_146 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g01136 | THO5, AtTHO5 | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene58570.t1 | THO5, AtTHO5,... | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g40245 | THO5, AtTHO5 | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g02128 | THO5, AtTHO5 | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.02 | OrthoFinder output from all 47 species | |
MA_7673g0010 | THO5, AtTHO5 | THO complex subunit 5A OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g10313 | THO5, AtTHO5 | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g078830.3.1 | THO5, AtTHO5,... | component THOC5 of mRNP trafficking THO subcomplex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
MF | GO:0008483 | transaminase activity | IEP | HCCA |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019163 | THO_Thoc5 | 66 | 419 |
No external refs found! |