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  5. Sam_g12806

Sam_g12806


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12806

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00127800 CAM3, acam-3,... Calmodulin OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Als_g28698 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11129 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07309 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06394 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g17190.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species
LOC_Os12g41110.1 ACAM-6, CAM6,... Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Msp_g10646 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39673 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004511 CAM3, acam-3 calcium sensor *(CML) & original description: CDS=2-589 0.03 OrthoFinder output from all 47 species
Sam_g38145 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g081170.2.1 CAM3, acam-3,... Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Spa_g03236 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02345 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 145
IPR039508 KASH5_EF-hand-like_dom 16 75
No external refs found!