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  5. Sam_g12416

Sam_g12416


Description : not classified & original description: none


Gene families : OG0004219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12416

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00254210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G61480 No alias Quinoprotein amine dehydrogenase, beta chain-like;... 0.02 OrthoFinder output from all 47 species
Ala_g08496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g54500.1 LOC_Os02g54500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432719g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g05920.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g20303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018051 No alias not classified & original description: CDS=1-3018 0.02 OrthoFinder output from all 47 species
Smo75259 No alias No description available 0.04 OrthoFinder output from all 47 species
Zm00001e023736_P002 Zm00001e023736 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR009771 Ribosome_control_1 678 932
No external refs found!