Sam_g12054


Description : not classified & original description: none


Gene families : OG0000441 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000441_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12054

Target Alias Description ECC score Gene Family Method Actions
Aev_g34421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00094.t1 Aspi01Gene00094 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10221.t1 Aspi01Gene10221 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16803.t1 Aspi01Gene16803 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19251.t1 Aspi01Gene19251 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28209.t1 Aspi01Gene28209 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41886.t1 Aspi01Gene41886 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55627.t1 Aspi01Gene55627 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62811.t1 Aspi01Gene62811 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66386.t1 Aspi01Gene66386 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_1990V3.1 Pp3c18_1990 No annotation 0.01 OrthoFinder output from all 47 species
Sam_g01619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g01663 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g02112 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03348 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g06669 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g12516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14439 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g16032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29069 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g34492 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g36933 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g39482 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g48134 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sam_g49200 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!