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  5. Sam_g11950

Sam_g11950


Description : not classified & original description: none


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00091320 LGT6, GAUT12,... Probable galacturonosyltransferase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G54690 LGT6, GAUT12, IRX8 galacturonosyltransferase 12 0.02 OrthoFinder output from all 47 species
Adi_g061055 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02222 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Als_g14467 GAUT8, QUA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14763 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Als_g14764 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Aop_g11272 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011212 LGT1, GAUT1 not classified & original description: CDS=722-2791 0.05 OrthoFinder output from all 47 species
Azfi_s0034.g025186 GAUT9 not classified & original description: CDS=156-1763 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035633 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.04 OrthoFinder output from all 47 species
Cba_g05264 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Cba_g13854 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Dcu_g07593 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
Dcu_g14771 LGT4, GAUT10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03828 GAUT8, QUA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15665 GAUT13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001509001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01006978001 GAUT4 Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011500001 GAUT14 Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01014592001 LGT6, GAUT12, IRX8 Probable galacturonosyltransferase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023883001 GAUT3 Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03420 GAUT4 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_06306 GAUT8, QUA1 Galacturonosyltransferase 8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_33416 GAUT13 Probable galacturonosyltransferase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_39838 GAUT7, LGT7 component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g51130.1 GAUT9, LOC_Os02g51130 Probable galacturonosyltransferase 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g40720.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g48370.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
LOC_Os11g03160.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
Len_g02827 GAUT8, QUA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431360g0010 LGT1, GAUT1 component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
MA_118216g0010 GAUT7, LGT7 component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species
MA_12186g0010 GAUT4 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g29030.1 LGT1, GAUT1 Polygalacturonate 4-alpha-galacturonosyltransferase... 0.02 OrthoFinder output from all 47 species
Nbi_g02277 GAUT8, QUA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17294 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ore_g20308 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Pir_g12555 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33129 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004307 LGT1, GAUT1 not classified & original description: CDS=1-1737 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004703 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Sam_g15907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo268781 GAUT13 Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g08594 GAUT13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001992_P003 GAUT11, Zm00001e001992 Probable galacturonosyltransferase 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e023901_P001 GAUT9, Zm00001e023901 Probable galacturonosyltransferase 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 225 507
No external refs found!