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Description : pre-mRNA-processing protein *(PRP39) & original description: none
Gene families : OG0002297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04080 | PRP39 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G46400 | AT PRP39-2, PRP39-2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g061191 | PRP39 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12647 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g37742 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene30896.t2 | PRP39, Aspi01Gene30896 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0064.g035594 | PRP39 | pre-mRNA-processing protein *(PRP39) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g25483 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15145 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03812 | AT PRP39-2, PRP39-2 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23571 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g32658 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g19659 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g38712 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10295 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g06717 | AT PRP39-2, PRP39-2 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001814 | PRP39 | pre-mRNA-processing protein *(PRP39) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22654 | No alias | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03914 | AT PRP39-2, PRP39-2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g38613 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56288 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004246_P001 | AT PRP39-2,... | pre-mRNA-processing protein (PRP39) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006302 | double-strand break repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |