Description : not classified & original description: none
Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g11691 | |
Cluster | HCCA: Cluster_120 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00045p00153850 | FHY2, HY8, PHYA,... | External stimuli response.light.red/far red light.PHY... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00047p00076620 | PHYC,... | External stimuli response.light.red/far red light.PHY... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00047p00076760 | PHYC,... | External stimuli response.light.red/far red light.PHY... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g07985 | HY3, OOP1, PHYB | temperature sensor protein *(PHY-B) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene09133.t1 | HY3, OOP1, PHYB,... | temperature sensor protein *(PHY-B) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001067.18 | PHYC | Phytochrome C OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g04116 | HY3, OOP1, PHYB | temperature sensor protein *(PHY-B) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g09261 | HY3, OOP1, PHYB | temperature sensor protein *(PHY-B) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g12690 | HY3, OOP1, PHYB | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g32315 | HY3, OOP1, PHYB | phytochrome photoreceptor *(PHY) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11409 | HY3, OOP1, PHYB | temperature sensor protein *(PHY-B) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g24766 | HY3, OOP1, PHYB | phytochrome photoreceptor *(PHY) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g059870.4.1 | HY3, OOP1, PHYB,... | phytochrome photoreceptor (PHY). temperature sensor... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g20479 | HY3, OOP1, PHYB | temperature sensor protein *(PHY-B) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0043531 | ADP binding | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No external refs found! |