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  5. Sam_g11446

Sam_g11446


Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11446

Target Alias Description ECC score Gene Family Method Actions
Ala_g10801 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_35273 UBQ10 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
LOC_Os07g30640.1 LOC_Os07g30640 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_89348g0010 UBQ14 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
Sam_g25855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027066_P001 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.04 OrthoFinder output from all 47 species
Zm00001e036492_P001 Zm00001e036492 Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 141 212
IPR000626 Ubiquitin-like_dom 65 136
IPR000626 Ubiquitin-like_dom 1 60
No external refs found!