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  5. Sam_g11444

Sam_g11444


Description : RUB ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11444

Target Alias Description ECC score Gene Family Method Actions
AT1G65350 UBQ13 ubiquitin 13 0.02 OrthoFinder output from all 47 species
Aob_g10329 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g07890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23080.t1 UBQ11, Aspi01Gene23080 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G071800.1 UBQ11, Ceric.12G071800 UBQ ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Cre11.g467567 UBQ10 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01036803001 RUB1, ATRUB1, NEDD8 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os07g30640.1 LOC_Os07g30640 component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_13121g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Mp7g14690.1 UBQ6 component RPS27a of SSU proteome 0.03 OrthoFinder output from all 47 species
Pir_g32077 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48573 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!