Sam_g11204


Description : E3 ubiquitin ligase *(DA2) & original description: none


Gene families : OG0002364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11204

Target Alias Description ECC score Gene Family Method Actions
Adi_g082711 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15219 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043255 No alias E3 ubiquitin ligase *(DA2) & original description: CDS=442-1869 0.02 OrthoFinder output from all 47 species
Azfi_s0319.g064436 No alias E3 ubiquitin ligase *(DA2) & original description: CDS=250-1674 0.03 OrthoFinder output from all 47 species
Ceric.10G003100.1 Ceric.10G003100 E3 ubiquitin ligase *(DA2) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G086000.1 Ceric.18G086000 E3 ubiquitin ligase *(DA2) & original description:... 0.09 OrthoFinder output from all 47 species
Dac_g45263 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09989 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g44275.1 LOC_Os06g44275 E3 ubiquitin ligase (DA2) 0.03 OrthoFinder output from all 47 species
Lfl_g31332 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11059 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10687 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15035 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06284 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0196.g025497 No alias E3 ubiquitin ligase *(DA2) & original description: CDS=113-1708 0.04 OrthoFinder output from all 47 species
Tin_g11816 No alias E3 ubiquiTin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036468_P001 Zm00001e036468 E3 ubiquitin ligase (DA2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!