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  5. Sam_g11181

Sam_g11181


Description : histone H3 demethylase (ICU11/CP) of PRC2 histone methylation complex & original description: none


Gene families : OG0003972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11181

Target Alias Description ECC score Gene Family Method Actions
Adi_g084483 No alias histone H3 demethylase (ICU11/CP) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Als_g11707 No alias histone H3 demethylase (ICU11/CP) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
GSVIVT01008354001 No alias Uncharacterized PKHD-type hydroxylase At1g22950... 0.02 OrthoFinder output from all 47 species
LOC_Os01g31770.2 LOC_Os01g31770 Uncharacterized PKHD-type hydroxylase At1g22950... 0.02 OrthoFinder output from all 47 species
Tin_g24390 No alias histone H3 demethylase (ICU11/CP) of PRC2 histone... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!