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  5. Sam_g10664

Sam_g10664


Description : component *(ADA1) of SAGA transcription co-activator complex & original description: none


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10664

Target Alias Description ECC score Gene Family Method Actions
Adi_g103257 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Ceric.25G027300.1 Ceric.25G027300 component *(ADA1) of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
GSVIVT01016065001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Len_g01832 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Lfl_g02173 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Mp5g08050.1 No alias component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Pir_g19503 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Pir_g23844 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022496 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Solyc06g068610.3.1 Solyc06g068610 component ADA1 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species
Zm00001e011984_P001 Zm00001e011984 component ADA1 of SAGA transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Zm00001e040647_P001 Zm00001e040647 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 5 314
No external refs found!