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  5. Sam_g10638

Sam_g10638


Description : not classified & original description: none


Gene families : OG0006565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10638
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00130820 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G64430 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g01467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17473 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61228.t1 Aspi01Gene61228 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0141.g051344 No alias not classified & original description: CDS=389-2455 0.02 OrthoFinder output from all 47 species
Cba_g22395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G127300.1 Ceric.01G127300 not classified & original description: pacid=50590744... 0.09 OrthoFinder output from all 47 species
Dac_g01712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_34630 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g24390.1 LOC_Os08g24390 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g20533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g02030.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0201.g025610 No alias not classified & original description: CDS=95-1936 0.06 OrthoFinder output from all 47 species
Zm00001e002845_P002 Zm00001e002845 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!