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  5. Sam_g10572

Sam_g10572


Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10572

Target Alias Description ECC score Gene Family Method Actions
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.03 OrthoFinder output from all 47 species
Adi_g022934 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085558 SBE2.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16015 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23514 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05750 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47708.t1 SBE2.2, Aspi01Gene47708 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72900.t2 SBE2.2, Aspi01Gene72900 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cre10.g444700 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Dac_g23856 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08904 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04925 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16532 SBE2.2 starch branching enzyme 0.03 OrthoFinder output from all 47 species
MA_10435727g0010 EMB2729, BE1 1,4-alpha-glucan-branching enzyme 3,... 0.03 OrthoFinder output from all 47 species
Mp3g21170.1 EMB2729, BE1 starch branching enzyme 0.02 OrthoFinder output from all 47 species
Msp_g06324 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g08439 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38583 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021098 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: CDS=24-2909 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022118 SBE2.2 EC_2.4 glycosyltransferase & original description: CDS=185-2821 0.02 OrthoFinder output from all 47 species
Sam_g16543 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13017 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10197 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027838_P001 EMB2729, BE1,... starch branching enzyme 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 347 419
IPR006048 A-amylase/branching_C 726 818
IPR004193 Glyco_hydro_13_N 198 280
No external refs found!