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  5. Sam_g10150

Sam_g10150


Description : beta-type carbonic anhydrase & original description: none


Gene families : OG0000485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10150

Target Alias Description ECC score Gene Family Method Actions
Adi_g006857 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047978 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g126897 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00637 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12166 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15189 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21846 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene26047.t1 Aspi01Gene26047 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G071800.1 BCA4, CA4,... beta-type carbonic anhydrase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z083700.1 ATBCA3, BCA3,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z182800.1 CA1, ATBCA1,... beta-type carbonic anhydrase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z242300.1 ATBCA3, BCA3,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z242400.1 ATBCA3, BCA3,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g00426 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45841 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02164 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007745001 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
GSVIVT01009165001 ATBCA5, BCA5 Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_07686 BCA4, CA4, ATBCA4 Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
LOC_Os01g45274.1 CA18, CA2, BETA... Carbonic anhydrase, chloroplastic OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28910.1 ATBCA5, BCA5,... Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g10036 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29570 ATBCA3, BCA3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_25325g0010 CA1, ATBCA1,... Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Mp3g08980.1 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Pisum sativum... 0.03 OrthoFinder output from all 47 species
Msp_g12680 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08917 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09121 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18407 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01820 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17288 No alias beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28884 No alias beta-type carbonic anhydrase & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g10480 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10534 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42176 CA18, CA2, BETA CA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51277 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020360_P004 BCA4, CA4,... Carbonic anhydrase, chloroplastic OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001765 Carbonic_anhydrase 106 264
No external refs found!