1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g10088

Sam_g10088


Description : protease *(SBT2) & original description: none


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10088

Target Alias Description ECC score Gene Family Method Actions
AT1G04110 SDD1 Subtilase family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009483 No alias protease *(SBT2) & original description: CDS=248-2929 0.02 OrthoFinder output from all 47 species
Dde_g08357 SLP3 protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
MA_58710g0010 No alias Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g08398 No alias protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0229.g026396 AIR3 not classified & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Smo416154 No alias Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo84191 SLP3 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Solyc02g021220.1.1 Solyc02g021220 protease (SBT1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041469 Subtilisin-like_FN3 537 631
IPR000209 Peptidase_S8/S53_dom 31 453
IPR003137 PA_domain 234 313
No external refs found!