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  5. Sam_g10060

Sam_g10060


Description : not classified & original description: none


Gene families : OG0000633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00031110 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT5G15050 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
Cba_g39141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G061900.1 Ceric.30G061900 not classified & original description: pacid=50608916... 0.02 OrthoFinder output from all 47 species
Ehy_g08607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029965001 UNE7 Beta-glucuronosyltransferase GlcAT14A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_33176 No alias AGP beta-1,6-glucuronosyltransferase 0.03 OrthoFinder output from all 47 species
MA_765295g0010 No alias Beta-glucuronosyltransferase GlcAT14B OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g18000.1 No alias Beta-glucuronosyltransferase GlcAT14A OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g20676 No alias beta-1,6-glucuronosyltransferase *(GlcAT14) & original... 0.03 OrthoFinder output from all 47 species
Ore_g34754 No alias beta-1,6-glucuronosyltransferase *(GlcAT14) & original... 0.02 OrthoFinder output from all 47 species
Ore_g35988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015791 No alias not classified & original description: CDS=548-2002 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0193.g025394 No alias beta-1,6-glucuronosyltransferase *(GlcAT14) & original... 0.03 OrthoFinder output from all 47 species
Sam_g27510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28304 No alias beta-1,6-glucuronosyltransferase *(GlcAT14) & original... 0.03 OrthoFinder output from all 47 species
Solyc10g007040.3.1 Solyc10g007040 Beta-glucuronosyltransferase GlcAT14A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g079490.2.1 UNE7, Solyc10g079490 Beta-glucuronosyltransferase GlcAT14A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 219 367
IPR003406 Glyco_trans_14 76 197
No external refs found!