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  5. Sam_g10039

Sam_g10039


Description : clade G phosphatase *(DBP) & original description: none


Gene families : OG0000632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000632_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10039
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene52973.t1 AtDBP1, DBP1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52974.t1 AtDBP1, DBP1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_30692 AtDBP1, DBP1 transcription factor (DBP) 0.03 OrthoFinder output from all 47 species
MA_16483g0010 No alias transcription factor (DBP) 0.02 OrthoFinder output from all 47 species
Zm00001e040337_P001 Zm00001e040337 transcription factor (DBP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 44 291
No external refs found!