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  5. Sam_g09800

Sam_g09800


Description : component *(PsbO/OEC33) of PS-II oxygen-evolving center & original description: none


Gene families : OG0003452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09800
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00176390 OEC33, PSBO-2,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.09 OrthoFinder output from all 47 species
AT3G50820 OEC33, PSBO-2, PSBO2 photosystem II subunit O-2 0.11 OrthoFinder output from all 47 species
AT5G66570 OEE33, PSBO1,... PS II oxygen-evolving complex 1 0.17 OrthoFinder output from all 47 species
Adi_g047191 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.11 OrthoFinder output from all 47 species
Aev_g08346 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.1 OrthoFinder output from all 47 species
Ala_g32349 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.08 OrthoFinder output from all 47 species
Als_g07877 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.06 OrthoFinder output from all 47 species
Als_g11375 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.08 OrthoFinder output from all 47 species
Aob_g07679 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.02 OrthoFinder output from all 47 species
Aop_g08907 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.09 OrthoFinder output from all 47 species
Aspi01Gene09645.t1 OEC33, PSBO-2,... component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.06 OrthoFinder output from all 47 species
Aspi01Gene47993.t1 OEC33, PSBO-2,... component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.04 OrthoFinder output from all 47 species
Azfi_s0043.g026946 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.03 OrthoFinder output from all 47 species
Cba_g21919 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.09 OrthoFinder output from all 47 species
Cba_g78094 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.03 OrthoFinder output from all 47 species
Ceric.13G017600.1 OEC33, PSBO-2,... component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.15 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020911.42 No alias Oxygen-evolving enhancer protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre09.g396213 OEE33, PSBO1,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.15 OrthoFinder output from all 47 species
Dac_g07616 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.13 OrthoFinder output from all 47 species
Dac_g07617 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.14 OrthoFinder output from all 47 species
Dcu_g15120 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.08 OrthoFinder output from all 47 species
Dcu_g15121 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.1 OrthoFinder output from all 47 species
Dcu_g28902 OEE33, PSBO1,... component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.16 OrthoFinder output from all 47 species
Dde_g14744 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.07 OrthoFinder output from all 47 species
Ehy_g00922 OEE33, PSBO1,... component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.11 OrthoFinder output from all 47 species
GSVIVT01009624001 OEC33, PSBO-2, PSBO2 Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.15 OrthoFinder output from all 47 species
Gb_39017 OEC33, PSBO-2, PSBO2 component PsbO/OEC33 of PS-II oxygen-evolving center 0.07 OrthoFinder output from all 47 species
LOC_Os01g31690.1 OEC33, PSBO-2,... component PsbO/OEC33 of PS-II oxygen-evolving center 0.15 OrthoFinder output from all 47 species
Len_g09570 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.1 OrthoFinder output from all 47 species
MA_491379g0010 OEC33, PSBO-2, PSBO2 component PsbO/OEC33 of PS-II oxygen-evolving center 0.07 OrthoFinder output from all 47 species
Mp6g15300.1 OEC33, PSBO-2, PSBO2 component PsbO/OEC33 of PS-II oxygen-evolving center 0.17 OrthoFinder output from all 47 species
Msp_g11725 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.09 OrthoFinder output from all 47 species
Nbi_g14245 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.13 OrthoFinder output from all 47 species
Ore_g20774 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.03 OrthoFinder output from all 47 species
Ore_g31123 OEE33, PSBO1,... component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.11 OrthoFinder output from all 47 species
Ore_g31124 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.11 OrthoFinder output from all 47 species
Ore_g31125 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.11 OrthoFinder output from all 47 species
Pir_g09358 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.09 OrthoFinder output from all 47 species
Pnu_g33894 OEE33, PSBO1,... component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.05 OrthoFinder output from all 47 species
Pp3c4_23170V3.1 OEC33, PSBO-2,... photosystem II subunit O-2 0.05 OrthoFinder output from all 47 species
Ppi_g18020 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.03 OrthoFinder output from all 47 species
Ppi_g34208 OEC33, PSBO-2, PSBO2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42655 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.06 OrthoFinder output from all 47 species
Ppi_g59838 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015767 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.08 OrthoFinder output from all 47 species
Smo272235 OEC33, PSBO-2, PSBO2 Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Smo449377 OEC33, PSBO-2, PSBO2 Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
Solyc02g065400.3.1 OEC33, PSBO-2,... component PsbO/OEC33 of PS-II oxygen-evolving center 0.1 OrthoFinder output from all 47 species
Solyc02g090030.2.1 OEC33, PSBO-2,... component PsbO/OEC33 of PS-II oxygen-evolving center 0.17 OrthoFinder output from all 47 species
Spa_g02826 OEC33, PSBO-2, PSBO2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g06494 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.09 OrthoFinder output from all 47 species
Spa_g18854 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.15 OrthoFinder output from all 47 species
Spa_g53717 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.06 OrthoFinder output from all 47 species
Tin_g03846 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.13 OrthoFinder output from all 47 species
Zm00001e013095_P001 OEE33, PSBO1,... component PsbO/OEC33 of PS-II oxygen-evolving center 0.13 OrthoFinder output from all 47 species
Zm00001e030278_P001 OEC33, PSBO-2,... component PsbO/OEC33 of PS-II oxygen-evolving center 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0010207 photosystem II assembly IEA Interproscan
MF GO:0010242 oxygen evolving activity IEA Interproscan
BP GO:0042549 photosystem II stabilization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002628 PSII_MSP 93 325
No external refs found!