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Sam_g09572


Description : subunit alpha of co-translational insertion system Sec61 subcomplex & original description: none


Gene families : OG0001704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09572

Target Alias Description ECC score Gene Family Method Actions
Ceric.06G086800.1 Ceric.06G086800 subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Dcu_g21487 No alias subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
LOC_Os03g11440.1 LOC_Os03g11440 subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Solyc10g007390.3.1 Solyc10g007390 subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR002208 SecY/SEC61-alpha 77 460
IPR019561 Translocon_Sec61/SecY_plug_dom 42 76
No external refs found!