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  5. Sam_g09421

Sam_g09421


Description : Golgi-ER retrograde trafficking cargo receptor *(PDI-C) & original description: none


Gene families : OG0004997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09421

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00269230 ATPDI12, PDI12,... Protein disulfide isomerase-like 5-4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Adi_g015473 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.02 OrthoFinder output from all 47 species
Ala_g13417 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.03 OrthoFinder output from all 47 species
Als_g31776 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.03 OrthoFinder output from all 47 species
Aop_g13215 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.03 OrthoFinder output from all 47 species
Lfl_g03953 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.02 OrthoFinder output from all 47 species
Solyc07g064250.3.1 ATPDI12, PDI12,... Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g00405 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.03 OrthoFinder output from all 47 species
Tin_g05576 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR039542 Erv_N 8 97
IPR012936 Erv_C 287 459
IPR013766 Thioredoxin_domain 148 237
No external refs found!