Description : regulatory protein of RNA homeostasis & original description: none
Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g09323 | |
Cluster | HCCA: Cluster_172 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g018593 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g01754 | No alias | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g14447 | No alias | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0017.g014471 | No alias | not classified & original description: CDS=103-1737 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g10561 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.10G007100.1 | Ceric.10G007100 | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.19G050600.1 | Ceric.19G050600 | not classified & original description: pacid=50576234... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.38G012000.1 | Ceric.38G012000 | not classified & original description: pacid=50579791... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g28420 | No alias | regulatory protein of RNA homeostasis & original... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g29816 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g32193 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000115 | No alias | platform ATPase CDC48 & original description: CDS=3649-4851 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0199.g025558 | No alias | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g26608 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g11119 | No alias | regulatory protein of RNA homeostasis & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e040205_P001 | Zm00001e040205 | C3H zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046872 | metal ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043248 | proteasome assembly | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
No external refs found! |