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  5. Sam_g09280

Sam_g09280


Description : not classified & original description: none


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09280

Target Alias Description ECC score Gene Family Method Actions
AT4G21970 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
Als_g22407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G063800.1 Ceric.38G063800 not classified & original description: pacid=50580613... 0.02 OrthoFinder output from all 47 species
Dcu_g00841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g43990.1 LOC_Os04g43990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g28989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080580.1.1 Solyc02g080580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035093_P001 Zm00001e035093 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 70 294
No external refs found!