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  5. Sam_g09045

Sam_g09045


Description : subunit gamma of cargo adaptor F-subcomplex & original description: none


Gene families : OG0004080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09045

Target Alias Description ECC score Gene Family Method Actions
AT4G34450 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.02 OrthoFinder output from all 47 species
Als_g23314 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Cre06.g310750 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g01867 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g29298 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
LOC_Os07g10150.1 LOC_Os07g10150 subunit gamma of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
MA_93046g0010 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Pp3c5_5240V3.1 Pp3c5_5240 coatomer gamma-2 subunit, putative / gamma-2 coat... 0.01 OrthoFinder output from all 47 species
Smo268757 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Solyc01g109540.4.1 Solyc01g109540 subunit gamma of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Spa_g17860 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Tin_g11774 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000949_P001 Zm00001e000949 subunit gamma of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Zm00001e033065_P001 Zm00001e033065 subunit gamma of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR032154 Coatomer_g_Cpla 777 890
IPR002553 Clathrin/coatomer_adapt-like_N 32 544
IPR013040 Coatomer_gsu_app_Ig-like_dom 631 774
No external refs found!