Sam_g08962


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08962

Target Alias Description ECC score Gene Family Method Actions
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61689.t1 Aspi01Gene61689 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.06 OrthoFinder output from all 47 species
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 747 883
IPR028275 CLU_N 48 118
IPR025697 CLU_dom 394 529
No external refs found!