Sam_g08285


Description : not classified & original description: none


Gene families : OG0001164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08285

Target Alias Description ECC score Gene Family Method Actions
AT1G61100 No alias disease resistance protein (TIR class), putative 0.02 OrthoFinder output from all 47 species
Adi_g008811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15255 CIP7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28609.t1 Aspi01Gene28609 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04744 CIP7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G030300.1 CIP7, Ceric.06G030300 not classified & original description: pacid=50620816... 0.02 OrthoFinder output from all 47 species
Ehy_g01672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g32164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004397001 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g39140 CIP7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g20180.1 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g01513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49213 CIP7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009574 No alias not classified & original description: CDS=550-5229 0.04 OrthoFinder output from all 47 species
Solyc07g063350.3.1 CIP7, Solyc07g063350 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g090270.3.1 Solyc09g090270 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g54055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!