Description : A-class RAB GTPase & original description: none
Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g08199 | |
Cluster | HCCA: Cluster_33 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g00785 | RABA4D, ATRABA4D | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09530 | RABA4D, ATRABA4D | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.20G065400.1 | RABA4D,... | A-class RAB GTPase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.22G072300.1 | RABA4D,... | A-class RAB GTPase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027396001 | RABA3, ATRAB-A3, ATRABA3 | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
Gb_03447 | RABA4D, ATRABA4D | A-class RAB GTPase | 0.06 | OrthoFinder output from all 47 species | |
Len_g12448 | RABA4D, ATRABA4D | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp3g12050.1 | ATRABA4C, RABA4C, SMG1 | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g096220.3.1 | RABA3, ATRAB-A3,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g010100.2.1 | AtRABA4a,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Spa_g38230 | RABA4D, ATRABA4D | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012878_P002 | AtRABA4a,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 73 | 233 |
No external refs found! |