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  5. Sam_g07876

Sam_g07876


Description : deubiquitinase & original description: none


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07876

Target Alias Description ECC score Gene Family Method Actions
Ehy_g15889 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g43840.1 LOC_Os02g43840 peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species
MA_10429895g0010 No alias peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species
Sam_g08094 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08954 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037195_P002 Zm00001e037195 peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species
Zm00001e038787_P002 Zm00001e038787 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 53 160
No external refs found!