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  5. Sam_g07860

Sam_g07860


Description : accessory protein *(PlCALM3) & original description: none


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07860
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g015730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01866 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08469 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029866 No alias not classified & original description: CDS=1-1461 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035491 No alias not classified & original description: CDS=1-2046 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046406 No alias not classified & original description: CDS=416-2011 0.03 OrthoFinder output from all 47 species
Ceric.06G031300.1 Ceric.06G031300 not classified & original description: pacid=50619961... 0.08 OrthoFinder output from all 47 species
Ceric.34G007000.1 Ceric.34G007000 not classified & original description: pacid=50623589... 0.03 OrthoFinder output from all 47 species
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Ehy_g08479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015603001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
LOC_Os01g65860.1 LOC_Os01g65860 Putative clathrin assembly protein At1g03050... 0.01 OrthoFinder output from all 47 species
LOC_Os02g07900.1 LOC_Os02g07900 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g55970.1 LOC_Os02g55970 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g02140.1 LOC_Os05g02140 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
LOC_Os05g35160.1 LOC_Os05g35160 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g45050.1 LOC_Os06g45050 Putative clathrin assembly protein At5g57200... 0.02 OrthoFinder output from all 47 species
Len_g11825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g22330.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Nbi_g09369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09579 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001850 No alias not classified & original description: CDS=1-1887 0.02 OrthoFinder output from all 47 species
Sam_g07862 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.05 OrthoFinder output from all 47 species
Spa_g08761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07524 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Zm00001e028613_P001 Zm00001e028613 Putative clathrin assembly protein At1g03050... 0.02 OrthoFinder output from all 47 species
Zm00001e029642_P001 Zm00001e029642 Putative clathrin assembly protein At2g25430... 0.03 OrthoFinder output from all 47 species
Zm00001e032313_P001 Zm00001e032313 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Zm00001e036365_P001 Zm00001e036365 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 34 302
No external refs found!