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  5. Sam_g07647

Sam_g07647


Description : component *(MAC5) of non-snRNP MOS4-associated complex & original description: none


Gene families : OG0002868 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002868_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07647

Target Alias Description ECC score Gene Family Method Actions
Adi_g079824 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Aev_g07822 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.02 OrthoFinder output from all 47 species
Aob_g03209 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009287 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Cre02.g075650 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Pir_g00563 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.02 OrthoFinder output from all 47 species
Solyc04g017710.3.1 Solyc04g017710 C3H zinc finger transcription factor. component MAC5 of... 0.05 OrthoFinder output from all 47 species
Solyc10g079190.3.1 Solyc10g079190 C3H zinc finger transcription factor. component MAC5 of... 0.03 OrthoFinder output from all 47 species
Spa_g19304 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.02 OrthoFinder output from all 47 species
Spa_g57287 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e036386_P001 Zm00001e036386 C3H zinc finger transcription factor. component MAC5 of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 230 288
IPR032297 Torus 154 194
No external refs found!