Sam_g07161

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g07161

Target	Alias	Description	ECC score	Gene Family Method
Ala_g23188	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g13604	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Len_g57215	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g17206	ATWBC11, ABCG11,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000545	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=630-2756	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s1312.g027986	ATWBC11, ABCG11,...	not classified & original description: CDS=352-2547	0.02	OrthoFinder output from all 47 species
Smo167920	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo234186	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	297	353
IPR003439	ABC_transporter-like_ATP-bd	118	268
IPR013525	ABC_2_trans	431	637

External Links

No external refs found!