Sam_g07065

Description : small subunit of ribonucleoside-diphosphate reductase heterodimer & original description: none

Gene families : OG0001999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001999_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g07065
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00179280	ATTSO2, TSO2,...	Nucleotide metabolism.deoxynucleotide...	0.03	OrthoFinder output from all 47 species
AT3G27060	ATTSO2, TSO2	Ferritin/ribonucleotide reductase-like family protein	0.04	OrthoFinder output from all 47 species
Ala_g24072	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.07	OrthoFinder output from all 47 species
Ala_g27950	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
Als_g39986	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Aop_g05123	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
Aop_g14647	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Aspi01Gene10489.t1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene24249.t1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Azfi_s0032.g024930	RNR2A, RNR2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Ceric.29G074000.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.1	OrthoFinder output from all 47 species
Ceric.35G052900.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000383.42	ATTSO2, TSO2	Nucleotide metabolism.deoxynucleotide...	0.02	OrthoFinder output from all 47 species
Cre12.g491050	ATTSO2, TSO2	Nucleotide metabolism.deoxynucleotide...	0.02	OrthoFinder output from all 47 species
Dac_g09812	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Dac_g15408	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.12	OrthoFinder output from all 47 species
Dcu_g02437	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Dde_g42962	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
GSVIVT01033090001	ATTSO2, TSO2	Nucleotide metabolism.deoxynucleotide...	0.16	OrthoFinder output from all 47 species
Gb_17999	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.04	OrthoFinder output from all 47 species
Gb_41675	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.08	OrthoFinder output from all 47 species
LOC_Os06g14620.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.06	OrthoFinder output from all 47 species
Len_g12992	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Lfl_g16609	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Lfl_g38600	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
MA_10430569g0010	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.04	OrthoFinder output from all 47 species
MA_1482g0010	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.06	OrthoFinder output from all 47 species
Mp1g09110.1	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	OrthoFinder output from all 47 species
Msp_g11511	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Msp_g42629	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Nbi_g12309	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Nbi_g12310	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Nbi_g13659	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Nbi_g40129	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Pir_g23684	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Ppi_g31950	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Ppi_g33668	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Solyc02g094160.1.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.04	OrthoFinder output from all 47 species
Spa_g09758	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.11	OrthoFinder output from all 47 species
Spa_g11227	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.11	OrthoFinder output from all 47 species
Spa_g11228	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.09	OrthoFinder output from all 47 species
Tin_g05900	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
Tin_g15350	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.08	OrthoFinder output from all 47 species
Tin_g42059	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.08	OrthoFinder output from all 47 species
Zm00001e007693_P001	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.1	OrthoFinder output from all 47 species
Zm00001e030963_P001	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.07	OrthoFinder output from all 47 species
Zm00001e036749_P001	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009262	deoxyribonucleotide metabolic process	None	Extended
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004797	thymidine kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005664	nuclear origin of replication recognition complex	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
MF	GO:0019136	deoxynucleoside kinase activity	IEP	HCCA
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	HCCA
MF	GO:0019206	nucleoside kinase activity	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000358	RNR_small_fam	18	284

External Links

No external refs found!

Sam_g07065

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation