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  5. Sam_g06816

Sam_g06816


Description : not classified & original description: none


Gene families : OG0002621 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002621_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06816
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aev_g03667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33910.t1 Aspi01Gene33910 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G054400.1 Ceric.15G054400 not classified & original description: pacid=50639639... 0.04 OrthoFinder output from all 47 species
Dcu_g22787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g63410.1 LOC_Os01g63410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g51065 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001084 No alias not classified & original description: CDS=124-918 0.02 OrthoFinder output from all 47 species
Solyc09g014215.2.1 Solyc09g014215 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g03151 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g09283 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e028731_P001 Zm00001e028731 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!