Sam_g06806


Description : not classified & original description: none


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06806

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00176760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00166770 evm_27.TU.AmTr_v1... Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G29520 No alias AWPM-19-like family protein 0.02 OrthoFinder output from all 47 species
AT5G18970 No alias AWPM-19-like family protein 0.03 OrthoFinder output from all 47 species
AT5G46530 No alias AWPM-19-like family protein 0.02 OrthoFinder output from all 47 species
Adi_g011454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04010 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene34671.t1 Aspi01Gene34671 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007412 No alias not classified & original description: CDS=218-754 0.02 OrthoFinder output from all 47 species
Ceric.30G074200.1 Ceric.30G074200 not classified & original description: pacid=50608798... 0.06 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.02 OrthoFinder output from all 47 species
Dcu_g16603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40048 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017867001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g14530.1 LOC_Os01g14530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g03103 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g06526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428394g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_199g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g01060.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g11224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018226 No alias not classified & original description: CDS=107-538 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019776 No alias not classified & original description: CDS=123-641 0.02 OrthoFinder output from all 47 species
Sam_g00344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g080290.3.1 Solyc01g080290 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020052_P001 Zm00001e020052 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026824_P001 Zm00001e026824 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e028127_P001 Zm00001e028127 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 16 139
No external refs found!