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  5. Sam_g06545

Sam_g06545


Description : catalytic component *(CRD1) of Mg-protoporphyrin IX monomethylester cyclase complex & original description: none


Gene families : OG0004655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06545
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00128730 ACSF, CHL27,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.08 OrthoFinder output from all 47 species
AT3G56940 ACSF, CHL27, CRD1 dicarboxylate diiron protein, putative (Crd1) 0.13 OrthoFinder output from all 47 species
Adi_g049154 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.14 OrthoFinder output from all 47 species
Aev_g38236 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.11 OrthoFinder output from all 47 species
Ala_g10363 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.08 OrthoFinder output from all 47 species
Als_g00899 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Aob_g28944 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.1 OrthoFinder output from all 47 species
Aop_g08445 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.07 OrthoFinder output from all 47 species
Aspi01Gene49220.t1 ACSF, CHL27,... catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
Azfi_s0109.g045430 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.1 OrthoFinder output from all 47 species
Cba_g01814 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.08 OrthoFinder output from all 47 species
Ceric.04G007600.1 ACSF, CHL27,... catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.13 OrthoFinder output from all 47 species
Ceric.06G045000.1 ACSF, CHL27,... catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.16 OrthoFinder output from all 47 species
Cre12.g510050 ACSF, CHL27, CRD1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.13 OrthoFinder output from all 47 species
Dac_g15414 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.15 OrthoFinder output from all 47 species
Dcu_g08776 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Dde_g26078 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Ehy_g05746 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
GSVIVT01025841001 ACSF, CHL27, CRD1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.09 OrthoFinder output from all 47 species
Gb_35840 ACSF, CHL27, CRD1 catalytic component CRD1 of Mg-protoporphyrin IX... 0.06 OrthoFinder output from all 47 species
LOC_Os01g17170.1 ACSF, CHL27,... catalytic component CRD1 of Mg-protoporphyrin IX... 0.1 OrthoFinder output from all 47 species
Len_g09563 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.14 OrthoFinder output from all 47 species
Lfl_g05998 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.08 OrthoFinder output from all 47 species
MA_10433955g0010 ACSF, CHL27, CRD1 Magnesium-protoporphyrin IX monomethyl ester [oxidative]... 0.12 OrthoFinder output from all 47 species
MA_10433955g0020 ACSF, CHL27, CRD1 catalytic component CRD1 of Mg-protoporphyrin IX... 0.12 OrthoFinder output from all 47 species
Mp5g03060.1 ACSF, CHL27, CRD1 catalytic component CRD1 of Mg-protoporphyrin IX... 0.17 OrthoFinder output from all 47 species
Msp_g09863 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Nbi_g04715 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
Pir_g05448 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.07 OrthoFinder output from all 47 species
Pir_g05449 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Pir_g66240 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Pp3c7_26570V3.1 ACSF, CHL27,... dicarboxylate diiron protein, putative (Crd1) 0.01 OrthoFinder output from all 47 species
Ppi_g18504 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020120 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Smo267431 ACSF, CHL27, CRD1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
Smo89989 ACSF, CHL27, CRD1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.08 OrthoFinder output from all 47 species
Solyc10g077040.2.1 ACSF, CHL27,... catalytic component CRD1 of Mg-protoporphyrin IX... 0.1 OrthoFinder output from all 47 species
Spa_g07847 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.07 OrthoFinder output from all 47 species
Spa_g07848 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
Spa_g14748 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.09 OrthoFinder output from all 47 species
Spa_g22930 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.06 OrthoFinder output from all 47 species
Spa_g42373 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Tin_g15383 ACSF, CHL27, CRD1 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.12 OrthoFinder output from all 47 species
Zm00001e017387_P001 ACSF, CHL27,... catalytic component CRD1 of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Zm00001e025478_P001 ACSF, CHL27,... catalytic component CRD1 of Mg-protoporphyrin IX... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003251 Rr_diiron-bd_dom 145 278
No external refs found!