Sam_g06475


Description : not classified & original description: none


Gene families : OG0004207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06475

Target Alias Description ECC score Gene Family Method Actions
Ala_g17000 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g24939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

  • Type GO Term Name Evidence Source
    MF GO:0000166 nucleotide binding IEP HCCA
    MF GO:0000287 magnesium ion binding IEP HCCA
    BP GO:0000723 telomere maintenance IEP HCCA
    CC GO:0000781 chromosome, telomeric region IEP HCCA
    MF GO:0003674 molecular_function IEP HCCA
    MF GO:0003677 DNA binding IEP HCCA
    MF GO:0003697 single-stranded DNA binding IEP HCCA
    MF GO:0005524 ATP binding IEP HCCA
    CC GO:0005956 protein kinase CK2 complex IEP HCCA
    BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
    BP GO:0006259 DNA metabolic process IEP HCCA
    BP GO:0006281 DNA repair IEP HCCA
    BP GO:0006399 tRNA metabolic process IEP HCCA
    BP GO:0006400 tRNA modification IEP HCCA
    BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
    BP GO:0006807 nitrogen compound metabolic process IEP HCCA
    BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
    BP GO:0006996 organelle organization IEP HCCA
    BP GO:0008033 tRNA processing IEP HCCA
    MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
    BP GO:0008152 metabolic process IEP HCCA
    MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
    MF GO:0008193 tRNA guanylyltransferase activity IEP HCCA
    BP GO:0009451 RNA modification IEP HCCA
    MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
    MF GO:0016779 nucleotidyltransferase activity IEP HCCA
    MF GO:0017076 purine nucleotide binding IEP HCCA
    MF GO:0019207 kinase regulator activity IEP HCCA
    MF GO:0019887 protein kinase regulator activity IEP HCCA
    MF GO:0030234 enzyme regulator activity IEP HCCA
    MF GO:0030554 adenyl nucleotide binding IEP HCCA
    BP GO:0032200 telomere organization IEP HCCA
    MF GO:0032553 ribonucleotide binding IEP HCCA
    MF GO:0032555 purine ribonucleotide binding IEP HCCA
    MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
    CC GO:0032991 protein-containing complex IEP HCCA
    BP GO:0033554 cellular response to stress IEP HCCA
    BP GO:0034470 ncRNA processing IEP HCCA
    BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
    MF GO:0036094 small molecule binding IEP HCCA
    MF GO:0043167 ion binding IEP HCCA
    MF GO:0043168 anion binding IEP HCCA
    BP GO:0043170 macromolecule metabolic process IEP HCCA
    BP GO:0044237 cellular metabolic process IEP HCCA
    BP GO:0044238 primary metabolic process IEP HCCA
    BP GO:0046483 heterocycle metabolic process IEP HCCA
    BP GO:0051276 chromosome organization IEP HCCA
    BP GO:0051716 cellular response to stimulus IEP HCCA
    CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
    MF GO:0070568 guanylyltransferase activity IEP HCCA
    BP GO:0071704 organic substance metabolic process IEP HCCA
    BP GO:0090304 nucleic acid metabolic process IEP HCCA
    MF GO:0097159 organic cyclic compound binding IEP HCCA
    MF GO:0097367 carbohydrate derivative binding IEP HCCA
    CC GO:0098687 chromosomal region IEP HCCA
    MF GO:0098772 molecular function regulator activity IEP HCCA
    MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
    MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
    CC GO:0140535 intracellular protein-containing complex IEP HCCA
    MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
    MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
    MF GO:1901265 nucleoside phosphate binding IEP HCCA
    BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
    MF GO:1901363 heterocyclic compound binding IEP HCCA
    CC GO:1902494 catalytic complex IEP HCCA
    CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
    CC GO:1902911 protein kinase complex IEP HCCA
    CC GO:1990234 transferase complex IEP HCCA

    No InterPro domains available for this sequence

    No external refs found!