Sam_g06162


Description : not classified & original description: none


Gene families : OG0000414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06162

Target Alias Description ECC score Gene Family Method Actions
Adi_g002800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g065451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088374 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g097836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g128229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g39355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16288 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57876 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45575 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13731 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20514 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23240 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 147 170
IPR002885 Pentatricopeptide_repeat 172 204
No external refs found!