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  5. Sam_g04951

Sam_g04951


Description : not classified & original description: none


Gene families : OG0002443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g04951

Target Alias Description ECC score Gene Family Method Actions
Aop_g07140 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G088300.1 CML42, Ceric.11G088300 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G088700.1 CML42, Ceric.11G088700 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G089100.1 CML43, Ceric.11G089100 not classified & original description: pacid=50595630... 0.04 OrthoFinder output from all 47 species
Ceric.11G089300.1 UNE14, Ceric.11G089300 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G089600.1 Ceric.11G089600 calcium sensor *(CML) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.12G027300.1 ATCML9, CAM9,... not classified & original description: pacid=50601078... 0.05 OrthoFinder output from all 47 species
Msp_g06539 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21665 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g35719 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16246 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38845 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 100 164
No external refs found!