Sam_g04900

Description : small GTPase *(ROP) & original description: none

Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g04900

Target	Alias	Description	ECC score	Gene Family Method
AT4G28950	ARAC7, ROP9,...	RHO-related protein from plants 9	0.02	OrthoFinder output from all 47 species
AT5G45970	ARAC2, RAC2,...	RAC-like 2	0.03	OrthoFinder output from all 47 species
Adi_g003765	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g051540	ATRAC11, ARAC11,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g03825	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g08767	ATRAC4, ARAC4,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g03079	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g35244	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene65979.t1	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g27597	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.18G010600.1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.36G016200.1	ARAC3, RAC3,...	small GTPase *(ROP) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g03527	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g03585	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g04531	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18052	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009947001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
GSVIVT01018729001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.02	OrthoFinder output from all 47 species
LOC_Os02g50860.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species
Len_g23902	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g29379	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g36377	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g38022	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g11272	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01865	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g05700	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g13115	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g27441	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01891	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g04924	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g11624	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g51141	No alias	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g020800.3.1	ARAC7, ROP9,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species
Spa_g01671	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g10601	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g29989	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g36415	ARAC3, RAC3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g05437	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e031297_P001	ARAC7, ROP9,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	178

External Links

No external refs found!

Sam_g04900

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation