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  5. Lfl_g25833

Lfl_g25833


Description : transaldolase & original description: none


Gene families : OG0005673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005673_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g25833
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Adi_g041525 No alias transaldolase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62372 No alias transaldolase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g03265 No alias transaldolase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03670 No alias transaldolase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g70170.1 LOC_Os01g70170 transaldolase 0.03 OrthoFinder output from all 47 species
Len_g09703 No alias transaldolase & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g12350.1 No alias transaldolase 0.02 OrthoFinder output from all 47 species
Pir_g29059 No alias transaldolase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g41672 No alias transaldolase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06863 No alias transaldolase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001585 TAL/FSA 90 426
No external refs found!