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Aliases : CRR2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00246970 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G68930 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G02330 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g15170 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17661 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g32153 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g33956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36030 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03125 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03230 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04452 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05057 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05088 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05105 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05133 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05916 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06887 | RARE1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07226 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07490 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18796 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19013 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19076 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26570 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27948 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54594 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g24083 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28207 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34544.t1 | Aspi01Gene34544 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene51735.t1 | Aspi01Gene51735 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05301 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05323 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07181 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07466 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11529 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g17193 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20647 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29878 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g31307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45697 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G058700.1 | Ceric.05G058700 | not classified & original description: pacid=50578964... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G016300.1 | Ceric.16G016300 | not classified & original description: pacid=50589149... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G084300.1 | OTP86, Ceric.21G084300 | not classified & original description: pacid=50604215... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G008500.1 | Ceric.24G008500 | not classified & original description: pacid=50628459... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G016100.1 | OTP84, Ceric.26G016100 | not classified & original description: pacid=50599360... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G018400.1 | Ceric.28G018400 | not classified & original description: pacid=50571000... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G058400.1 | Ceric.36G058400 | not classified & original description: pacid=50568396... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020553.200 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03810 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08224 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08431 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26019 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28235 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19886 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31027 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g27650.1 | LOC_Os01g27650 | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g33700.1 | LOC_Os08g33700 | Pentatricopeptide repeat-containing protein At3g47530... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33773 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07406 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38464 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10721g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_6329g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_9463538g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g42294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21836 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43620 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02495 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12406 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13497 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g14457 | DOT4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g14870 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16241 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57713 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16080 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g18809 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22081 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31871 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32073 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g36018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39723 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g48074 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53384 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53545 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53964 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56908 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59214 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo107423 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | OrthoFinder output from all 47 species | |
| Smo109283 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Smo79052 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007850.2.1 | Solyc01g007850 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g065250.1.1 | EMB2744, Solyc11g065250 | Pentatricopeptide repeat-containing protein At5g39680... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g042400.1.1 | SLO1, Solyc12g042400 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g27589 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g28927 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03497 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04750 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05391 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06077 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12719 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g24074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30032 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30131 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g32155 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35629 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g36263 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g43906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034478_P001 | Zm00001e034478 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039394_P003 | Zm00001e039394 | Pentatricopeptide repeat-containing protein At5g04780,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0030488 | tRNA methylation | IEP | HCCA |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0034708 | methyltransferase complex | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 186 | 216 |
| IPR002885 | Pentatricopeptide_repeat | 287 | 317 |
| IPR002885 | Pentatricopeptide_repeat | 257 | 280 |
| IPR002885 | Pentatricopeptide_repeat | 360 | 382 |
| IPR002885 | Pentatricopeptide_repeat | 158 | 180 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 433 |
| IPR002885 | Pentatricopeptide_repeat | 78 | 126 |
| IPR046848 | E_motif | 503 | 565 |
| No external refs found! |