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  5. Sam_g02553

Sam_g02553


Description : lytic vacuole protein sorting receptor *(VSR) & original description: none


Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02553

Target Alias Description ECC score Gene Family Method Actions
AT3G52850 VSR1;1, BP80,... vacuolar sorting receptor homolog 1 0.02 OrthoFinder output from all 47 species
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.04 OrthoFinder output from all 47 species
Azfi_s0524.g075296 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g02279 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os04g52190.1 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
LOC_Os06g45380.1 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
Solyc10g074980.2.1 AtVSR2,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
Spa_g23158 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e038238_P001 VSR2;2, ATVSR3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!