Aliases : TOP1BETA, TOP1
Description : DNA topoisomerase *(TOP1) & original description: none
Gene families : OG0002461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002461_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00193620 | MGO1, TOP1,... | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.04 | OrthoFinder output from all 47 species | |
Aev_g03385 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g15949 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g18925 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene51541.t1 | TOP1BETA, TOP1,... | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0176.g056031 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: CDS=260-4141 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g15179 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.07G062200.1 | TOP1BETA, TOP1,... | DNA topoisomerase *(TOP1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.22G051300.1 | TOP1BETA, TOP1,... | DNA topoisomerase *(TOP1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g14421 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g35484 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g05911 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g25841 | MGO1, TOP1, TOP1ALPHA | DNA topoisomerase *(TOP1) & original description: none | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEA | Interproscan |
BP | GO:0006265 | DNA topological change | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |