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  5. Aob_g37323

Aob_g37323 (CBF5, AtCBF5, NAP57, AtNAP57)


Aliases : CBF5, AtCBF5, NAP57, AtNAP57

Description : pseudouridine synthase component *(Nap57/CBF5) of H/ACA snoRNP RNA pseudouridylation complex & original description: none


Gene families : OG0004128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g37323

Target Alias Description ECC score Gene Family Method Actions
Dde_g48852 CBF5, AtCBF5,... pseudouridine synthase component *(Nap57/CBF5) of H/ACA... 0.03 OrthoFinder output from all 47 species
Dde_g50563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007551 CBF5, AtCBF5,... pseudouridine synthase component *(Nap57/CBF5) of H/ACA... 0.02 OrthoFinder output from all 47 species
Sam_g17675 No alias pseudouridine synthase component *(Nap57/CBF5) of H/ACA... 0.02 OrthoFinder output from all 47 species
Zm00001e017259_P001 CBF5, AtCBF5,... pseudouridine synthase component Nap57/CBF5 of H/ACA... 0.02 OrthoFinder output from all 47 species
Zm00001e025570_P001 CBF5, AtCBF5,... pseudouridine synthase component Nap57/CBF5 of H/ACA... 0.03 OrthoFinder output from all 47 species
Zm00001e035655_P001 CBF5, AtCBF5,... pseudouridine synthase component Nap57/CBF5 of H/ACA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR032819 TruB_C 27 93
IPR002478 PUA 97 169
No external refs found!