Aob_g36101


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g36101

Target Alias Description ECC score Gene Family Method Actions
AT2G21090 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17504 OTP81 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30888 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33154 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20828 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g13540.1 EMB2261, LOC_Os07g13540 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Nbi_g07070 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000561 No alias not classified & original description: CDS=191-3046 0.02 OrthoFinder output from all 47 species
Sam_g36238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Tin_g17320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 49 72
IPR002885 Pentatricopeptide_repeat 122 142
No external refs found!