Aob_g32428


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g32428

Target Alias Description ECC score Gene Family Method Actions
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.09 OrthoFinder output from all 47 species
Adi_g011982 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g22914 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42701.t1 Aspi01Gene42701 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42702.t1 Aspi01Gene42702 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42704.t2 Aspi01Gene42704 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55584.t1 Aspi01Gene55584 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55586.t1 Aspi01Gene55586 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene55587.t1 Aspi01Gene55587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0185.g056668 No alias not classified & original description: CDS=100-1869 0.02 OrthoFinder output from all 47 species
Ceric.09G071300.1 Ceric.09G071300 not classified & original description: pacid=50588528... 0.05 OrthoFinder output from all 47 species
Ceric.09G071400.1 Ceric.09G071400 not classified & original description: pacid=50587640... 0.06 OrthoFinder output from all 47 species
Ceric.21G079300.1 Ceric.21G079300 not classified & original description: pacid=50602615... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001343.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g19066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013268001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g27110.1 LOC_Os02g27110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g03526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25510 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10343795g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_58863g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_74056g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g07580.2 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005700 No alias not classified & original description: CDS=17-12964 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018244 No alias not classified & original description: CDS=306-11297 0.03 OrthoFinder output from all 47 species
Sam_g17487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g09459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR009543 VPS13_VAB 2976 3108
IPR010482 Peroxin 2442 2559
IPR009291 Vps62 1767 1911
IPR009291 Vps62 1527 1686
IPR031642 VPS13_mid_RBG 80 320
No external refs found!